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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THYM rs7703057 chr5:176595522 G/A LOC388955 chr2:63849182-63850159:- -0.8 -11.34 2.36E-19 Box Plot
THYM rs7707346 chr5:176544299 C/G LOC388955 chr2:63849182-63850159:- -0.61 -8.33 6.14E-13 Box Plot
THYM rs77084393 chr5:176593844 G/C LOC388955 chr2:63849182-63850159:- -0.84 -12.03 8.59E-21 Box Plot
THYM rs7710269 chr5:176614529 G/A LOC388955 chr2:63849182-63850159:- -0.69 -9.96 2.03E-16 Box Plot
THYM rs7714695 chr5:176557445 C/T LOC388955 chr2:63849182-63850159:- -0.84 -12.35 1.81E-21 Box Plot
THYM rs7732930 chr5:176548594 C/T LOC388955 chr2:63849182-63850159:- -0.71 -10.71 5.18E-18 Box Plot
THYM rs7746643 chr6:26623996 G/A ZNF322B chr9:99957633-99961910:- 0.75 7.57 2.37E-11 Box Plot
THYM rs78042723 chr6:26617845 T/TA ZNF322B chr9:99957633-99961910:- 0.74 7.59 2.23E-11 Box Plot
THYM rs78210758 chr16:30063191 G/A ZNF254 chr19:24216207-24312763:+ 0.69 7.46 4.08E-11 Box Plot
THYM rs78363733 chr16:30030333 C/A ZNF254 chr19:24216207-24312763:+ 0.69 7.45 4.23E-11 Box Plot
THYM rs78523677 chr5:176551103 C/A LOC388955 chr2:63849182-63850159:- -0.73 -10.97 1.43E-18 Box Plot
THYM rs78546938 chr3:20428263 G/A CDC34 chr19:531712-542092:+ 0.69 7.11 2.16E-10 Box Plot
THYM rs7855704 chr9:78894105 T/G DARS chr2:136664247-136743670:- 1.24 7.18 1.52E-10 Box Plot
THYM rs7856503 chr9:78897196 G/T DARS chr2:136664247-136743670:- 1.25 7.27 1.0E-10 Box Plot
THYM rs7865552 chr9:78893918 G/A DARS chr2:136664247-136743670:- 1.24 7.24 1.15E-10 Box Plot